منابع مشابه
Pathway Databases
Following on from the profile of web resources for protein-protein interactions in our last issue, we present a survey of pathway databases. The resources available have, in the past, been mainly concerned with metabolic pathways, which are in general, better characterised. However, the number of resources featuring regulatory pathways, or networks, has been increasing for some time. This area ...
متن کاملProtein Databases
Proteins are sources of many peptides with diverse biological activity. Some of them are considered as valuable components of foods and drug targets with desired and designed biological activity. We are now entering an era rich in biological data in which the field of bioinformatics is poised to exploit this information in increasingly powerful ways. There are currently many databases all over ...
متن کاملAnalysis and Comparison of Metabolic Pathway Databases
Enormous amounts of data result from genome sequencing projects and new experimental methods. Within this tremendous amount of genomic data 30-40 per cent of the genes being identified in an organism remain unknown in terms of their biological function. As a consequence of this lack of information the overall schema of all the biological functions occurring in a specific organism cannot be prop...
متن کاملNutrition-Related Analysis of Pathway/Genome Databases
We present an algorithm that solves two related problems in the analysis of metabolic networks stored within a pathway/genome database. (1) The Forward Propagation Problem: given a set of nutrients that are inputs to the metabolic network, what compounds will be produced by the metabolic network? (2) The Backtracking Problem: given the results of a forward propagation, and given a set of essent...
متن کاملPathwayAccess: CellDesigner plugins for pathway databases
UNLABELLED CellDesigner provides a user-friendly interface for graphical biochemical pathway description. Many pathway databases are not directly exportable to CellDesigner models. PathwayAccess is an extensible suite of CellDesigner plugins, which connect CellDesigner directly to pathway databases using respective Java application programming interfaces. The process is streamlined for creating...
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ژورنال
عنوان ژورنال: Comparative and Functional Genomics
سال: 2001
ISSN: 1531-6912,1532-6268
DOI: 10.1002/cfg.123